The intuitionistic fuzzy set and intuitionistic fuzzy logic was introduced by Atanassov. It will give the very good output over the uncertainty because it contains membership and non-membership function. The intuitionistic fuzzy system provides amechanism for communication between computer system and humans. In thiswork we describe that the development of an intuitionistic fuzzy logic controller control the motor switch on and off for irrigation. In irrigation field and well water level measured by the sensors. The intuitionistic fuzzy system and mamdami intuitionistic fuzzy rules and Takagi Sugni Formula for the defuzzification are used to get the crisp output from an intuitionistic fuzzy input. The well water level and water level in agriculture land are calculated by applied using intuitionistic fuzzy rules applied in an inference engine using defuzzification method.